1. MSnbase::TMT10
    TMT 6/10-plex sets
    ReporterIons
  2. MSnbase::TMT10ETD
    TMT 6/10-plex sets
    ReporterIons
  3. MSnbase::TMT10HCD
    TMT 6/10-plex sets
    ReporterIons
  4. MSnbase::TMT11
    TMT 6/10-plex sets
    ReporterIons
  5. MSnbase::TMT11HCD
    TMT 6/10-plex sets
    ReporterIons
  6. MSnbase::TMT16
    TMT 6/10-plex sets
    ReporterIons
  7. MSnbase::TMT16HCD
    TMT 6/10-plex sets
    ReporterIons
  8. MSnbase::TMT6
    TMT 6/10-plex sets
    ReporterIons
  9. MSnbase::TMT6b
    TMT 6/10-plex sets
    ReporterIons
  10. MSnbase::TMT7
    TMT 6/10-plex sets
    ReporterIons
  11. MSnbase::TMT7b
    TMT 6/10-plex sets
    ReporterIons
  12. MSnbase::iTRAQ4
    iTRAQ 4-plex set
    ReporterIons
  13. MSnbase::iTRAQ5
    iTRAQ 4-plex set
    ReporterIons
  14. MSnbase::iTRAQ8
    iTRAQ 4-plex set
    ReporterIons
  15. MSnbase::iTRAQ9
    iTRAQ 4-plex set
    ReporterIons
  16. MSnbase::itraqdata
    Example 'MSnExp' and 'MSnSet' data sets
    MSnExp
  17. MSnbase::msnset
    Example 'MSnExp' and 'MSnSet' data sets
    MSnSet
  18. MSnbase::msnset2
    Example 'MSnExp' and 'MSnSet' data sets
    MSnSet
  19. MSnbase::naset
    Quantitative proteomics data imputation
    MSnSet
  20. pRoloc::andy2011params
    Class '"AnnotationParams"'
    AnnotationParams
  21. pRoloc::dunkley2006params
    Class '"AnnotationParams"'
    AnnotationParams
  22. qcmetrics::psm
    15N example data
    MSnSet
  23. QFeatures::feat1
    Feature example data
    QFeatures
  24. QFeatures::feat2
    Feature example data
    QFeatures
  25. QFeatures::feat3
    Example 'QFeatures' object after processing
    QFeatures
  26. QFeatures::ft_na
    Feature example data
    QFeatures
  27. QFeatures::hlpsms
    hyperLOPIT PSM-level expression data
  28. QFeatures::se_na2
    Feature example data
    SummarizedExperiment
  29. rWSBIM1207::GSE96870_intro
    RNA-seq data from Blackmore et al. 2017
    RangedSummarizedExperiment
  30. rWSBIM1207::GSE96870_intro_ranges
    RNA-seq data from Blackmore et al. 2017
    RangedSummarizedExperiment
  31. rWSBIM1207::beers
    Beer consumption data
  32. rWSBIM1207::clinical1
    TCGA data
  33. rWSBIM1207::clinical2
    TCGA data
  34. rWSBIM1207::clinical_table_ex1
    TCGA data
  35. rWSBIM1207::expression
    TCGA data
  36. rWSBIM1207::interroC
    Practice datasets
  37. rWSBIM1207::interroL
    Practice datasets
  38. rWSBIM1207::jdf1
    Data illustrating join operations
  39. rWSBIM1207::jdf2
    Data illustrating join operations
  40. rWSBIM1207::jdf3
    Data illustrating join operations
  41. rWSBIM1207::jdf4
    Data illustrating join operations
  42. rWSBIM1207::jdf5
    Data illustrating join operations
  43. rWSBIM1207::jdf6
    Data illustrating join operations
  44. rWSBIM1207::jdf7
    Data illustrating join operations
  45. rWSBIM1207::mvylng
    Data from Mulvey et al. 2015
  46. rWSBIM1207::peptides
    A vector of peptide sequences
  47. rWSBIM1322::cptac_na_se
    CPTAC data
    SummarizedExperiment
  48. rWSBIM1322::cptac_se
    CPTAC data
    SummarizedExperiment
  49. rWSBIM1322::cptac_se_prot
    CPTAC data
    SummarizedExperiment
  50. rWSBIM1322::g3
    Example for distances
  51. rWSBIM1322::giris
    Expression data
  52. rWSBIM1322::giris2
    Expression data
  53. rWSBIM1322::hiiragi2013df1
    Microarray expression data from Ohnishi et al. 2014.
  54. rWSBIM1322::hiiragi2013df2
    Microarray expression data from Ohnishi et al. 2014.
  55. rWSBIM1322::kem2_se
    SummarizedExperiment data
    SummarizedExperiment
  56. rWSBIM1322::metab1
    Metabolomics data (from MSMB)
    matrix|399 x 12
  57. rWSBIM1322::recapSE1
    Recap SummarizedExperiment data
    SummarizedExperiment
  58. rWSBIM1322::recapSE2
    Recap SummarizedExperiment data
    SummarizedExperiment
  59. rWSBIM1322::tdata1
    Example data for t-tests illustration
    matrix|100 x 6
  60. rWSBIM1322::tdata2
    Example data for t-tests illustration
  61. rWSBIM1322::tdata3
    Example data for t-tests illustration
    matrix|100 x 6
  62. rWSBIM1322::tdata4
    Example data for t-tests illustration
    matrix|100 x 6
  63. rWSBIM1322::up_selected
    Protein Uniprot identifiers
  64. rWSBIM1322::xy
    Example data for PCA illustration
  65. rWSBIM1322::xy0
    Example data for PCA illustration
  66. rWSBIM2122::gexp
    Single Gene Expression Data
  67. rWSBIM2122::lmannot
    Gene expression data
  68. rWSBIM2122::lmdata
    Gene expression data
  69. synapter::synapterTiny
    Loads a small test data for the 'synapter' package
    Synapter